19 papers · ranked by Valyu relevance
Gupta, Aryan, Reddy, Y. Raghu
—The automated translation of C code to Java code is a notoriously difficult task, fraught with challenges stemming from fundamental paradigm shifts (procedural vs. Object Oriented), memory models (manual pointers vs. Garbage Collection), and incompatible data types. This paper investigates the efficacy of 19 small…
Victor May, Diganta Misra, Yi Luo, Sridhar + 3 more
AI coding assistants are rapidly becoming integral to modern software development. A key challenge in this space is the continual need to migrate and modernize codebases in response to evolving software ecosystems. Traditionally, such migrations have relied on rule-based systems and human intervention. With the advent…
Norbert Sandor Szolnoki, Gabor Antal
We release \textsc{JavaVulBench}, a benchmark dataset and evaluation harness for Java vulnerability detection. The dataset contains $\sim$30{,}600 Java methods spanning 1{,}740 CVEs and 700+ projects, labelled at both method and line granularity, with per-CVE publication dates and five realistic split strategies…
Lukas Panneke, Heike Wehrheim
Folklore is often saying "The Java memory model is broken." Therefore, several approaches have proposed repairs, only to find new programs exhibiting unexpected, unintuitive behavior or the model forbidding standard compiler optimizations. The complexity of defining a memory model for concurrent Java lies in the fact…
Camila A. Paiva, Raquel Maximino, Frederico Paiva, Rafael Accetta Vieira + 7 more
Database Management Systems (DBMSs) are widely used to store, retrieve, and manage the data handled by modern applications. Although prior work has studied the co-evolution of DBMSs and application source code, less is known about DBMS adoption, co-use, and replacement in real systems. This paper presents a historical…
Akshatha Shenoy, Carlo A. Furia
The landscape of automated formal verification is populated by techniques that make prominently different trade-offs: some focus on expressiveness and precision, supporting the verification of complex properties; others favor scalability and practicality, so that they are applicable to larger programs using different…
Young-Sik Kim, Chan-Hun Jung, Seon-Young Kim, Hyungyung Chai + 3 more
Alcohol hangover is a significant health concern worldwide. Java water-dropwort (Oenanthe javanica) has been traditionally used in East Asia for treating hepatitis, jaundice, and alcohol hangovers. This study evaluated the effects of java water-dropwort extract formulation on alcohol metabolism and hangover symptoms. A…
Bai-an Lin, John J. Pogonoski, Fahmi, Kunto Wibowo + 2 more
In this study, we describe a newly recognized croaker (Sciaenidae), Johniusjavaensissp. nov. based on five specimens (87-121 mm in standard length) from the southern coast of Java, Indonesia. Specifically, taxonomic reassessment of sciaenids collected from fish markets on the islands of Java, Bali, and Lombok of…
Olivia W Lang, Benjamin Beer, Dean Zhang, Courtney LeSon + 3 more
The growing diversity of genomic and epigenomic assays has driven a parallel expansion in data formats, analysis workflows, and figure-generation tools. However, tools for analyzing data and assembling publication-quality figures are often specialized to a specific assay, dramatically limiting their interoperability…
Khashayar Etemadi, Zhendong Su
Automated fixing of performance issues is gaining increasing attention. However, existing benchmarks of execution time improvement patches are fixed datasets that target Python, C++, or .NET and cannot be extended to new patches according to user-defined configurations. In this paper, we present JETO-Mine, the first…
Bo Wen, Kai Li, Michael Riffle, Michael J. MacCoss + 2 more
De novo peptide sequencing detects peptides directly from tandem mass spectra without a protein sequence database, and deep learning has substantially advanced its performance. Casanovo, one such widely used model, is distributed as a Python command-line program. Consequently, installation, GPU and dependency…
Ristiyanto, Farida Dwi Handayani, Sitti Ganefa Pakki, Arief Mulyono + 13 more
Bubonic plague has been reported both in cities and villages, and even in lowlands, such as Surabaya, Malang, Semarang, and Cirebon from 1911 to 1947. Since 1968, Y. pestis has been isolated from fleas in rural areas and hilly areas more than 500 m above sea level. Although bubonic plague is not reported, Y. pestis is…
M. Shahbaz Ismail, Sara Shahzad, Fahmi H. Quradaa, Sajid Anwar
Semantic code clone detection plays an essential role in software maintenance and quality assurance, as it helps uncover fragments of code that express the same logic even when their syntax has been altered or deliberately obfuscated. In this study, we propose a framework that combines hybrid representation learning…
Abdullah Langgeng, Marie Sigaud, Wendi Prameswari, Nur Purba Priambada + 4 more
Rehabilitation centers are central to the conservation of Javan slow lorises (Nycticebus javanicus) by providing care for individuals confiscated from trade and preparing them for potential release. To evaluate behavioral readiness for reintroduction, we quantified activity budgets and boldness in 10 adult N. javanicus…
Areen Arabiat, Hamza Abu Owida, Suhaila Abuowaida, Nawaf Alshdaifat + 2 more
This study emphasizes the potential of computational techniques in cancer risk assessment, highlighting opportunities for specific and data-driven healthcare solutions. It examines the use of artificial intelligence (AI), machine learning (ML), and deep learning (DL) approaches to improve cancer risk assessment using a…
Abdillah Azzam Wahyudin, Yudithia Maxiselly, Intan Ratna Dewi Anjarsari, Citra Bakti + 4 more
Liberoid coffee (Coffea liberica), a type of coffee cultivated in certain regions in Indonesia. West Java is one of the Indonesian provinces that cultivates liberoid coffee, include Liberica and Excelsa, with limited diversity records. This study aimed to assess the current status of Liberoid coffee in West Java…
Gusti Ayu Prani Pradani, Almira Alifia, Alia Putri Syahbaniati, Alamanda Larasmanah + 9 more
As drug-resistant tuberculosis (DR-TB) cases rise, resistance detection in a timely manner is essential to lead effective treatment and limit transmission. Targeted next-generation sequencing (tNGS) offers quick results with multiple important drugs covered, but assessments regarding its performance for DR-TB…
Joshua S. Bamford, Amanda R. Bamford
Drumming—rhythmic, percussive sound production using body parts or external objects—is rare among non-human animals, with confirmed tool-assisted cases previously limited to primates and Palm Cockatoos. Here, we report the first documented instance of spontaneous, tool-assisted drumming in a Galah (Eolophus…
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For decades, molecular visualization software has been fundamental to education and research in chemistry, structural biology, and materials science. These tools have enabled the inspection of structures, dynamics, and interactions, yet their reliance on two-dimensional (2D) interfaces imposes persistent limitations.…