6 papers · ranked by Valyu relevance
Robert Meyer, Klaus Obermayer
pypet (Python parameter exploration toolkit) is a new multi-platform Python toolkit for managing numerical simulations. Sampling the space of model parameters is a key aspect of simulations and numerical experiments. pypet is designed to allow easy and arbitrary sampling of trajectories through a parameter space beyond…
Jonas Engicht, R. Maximilian Bee, Tobias Koch
This paper introduces an open-source Python package for simplified, customizable computerized adaptive testing (CAT) using Bayesian methods for ability estimation. It addresses the lack of sophisticated packages for CAT in the Python programming language. Moreover, it bridges the gap between the construction and…
Jinzhen Han, Seung Jun Lee, Hong Sik Yun, Kwang Bae Kim + 2 more
'Sang Won Bae' 'Stefan Steiniger'] Since the first receiver independent exchange format (RINEX) version was released in 1989, it has gone through several versions, making the existing software, such as TEQC, incompatible with certain later versions. This study proposes a new Python package named PyRINEX, which is…
Berk Ekmekci, Charles E. McAnany, Cameron Mura, Francis Ouellette
Computing has revolutionized the biological sciences over the past several decades, such that virtually all contemporary research in molecular biology, biochemistry, and other biosciences utilizes computer programs. The computational advances have come on many fronts, spurred by fundamental developments in hardware…
Pierre Fernique, Christophe Pradal, Nick Higham
Most of Python and R scientific packages incorporate compiled scientific libraries to speed up the code and reuse legacy libraries. While several semi-automatic solutions exist to wrap these compiled libraries, the process of wrapping a large library is cumbersome and time consuming. In this paper, we introduce…
Hugo Cornelis, Armando L. Rodriguez, Allan D. Coop, James M. Bower + 1 more
The GENESIS simulation platform was one of the first broad-scale modeling systems in computational biology to encourage modelers to develop and share model features and components. Supported by a large developer community, it participated in innovative simulator technologies such as benchmarking, parallelization, and…