7 papers · ranked by Valyu relevance
Fabio Cumbo, Kabir Dhillon, M. Hassan Najafi, Sercan Aygun + 1 more
The exponential growth of genomic databases necessitates alignment-free methods for comparing genomes. While MinHash-based tools have revolutionized this field by efficiently estimating the Average Nucleotide Identity based on k-mer sets, they inherently discard structural genomic information. We introduce HyperSketch…
Gyungwon Yun, Jin Pyo Kang, Ho‐Sung Lee, Ik‐Hyeon Jeon + 5 more
Although probabilistic computing offers a route to quantum-inspired optimization at room temperature, existing probabilistic bits (p-bits) often depend on non-CMOS devices or circuit-intensive randomness. Here, we report a CMOS-compatible p-bit that harnesses intrinsic random telegraph noise (RTN) in a fully depleted…
Odin Zhang, Jiaqi Wang, Tuscan Rock Thompson, Ziyi You + 3 more
Biomolecular interactions, including protein–protein interactions, protein–nucleic acid recognition, and protein–small molecule binding, underlie a wide range of biological processes and therapeutic mechanisms. Although recent de novo design methods can generate candidate binders for diverse molecular targets…
Hayden Johnson, Boris A. Vinatzer, Reza Mazloom, Kassaye Belay + 2 more
Rapid and accurate microbial identification is critical for interpreting biological data in basic research and when making applied decisions on how to effectively treat patients and control human, animal, and plant diseases. Advancements in high-throughput sequencing have the potential to expedite fungal species…
Hadeer Kamal, Amira Y. Haikal, Mahmoud M. Saafan
Traffic collisions and congestion represent significant challenges within intelligent transportation systems (ITS). Consequently, a vehicular ad-hoc network (VANET) has been established. Numerous architectures have been incorporated into VANETs to manage the extensive data generated by vehicles. Collaboration with fog…
Namasi G Sankar, Georgios Miliotis, Simon Caton
Genome assembly is important in infectious disease surveillance, antimicrobial resistance monitoring, and cancer genomics. The task of reconstructing full genomic sequences from fragmented reads, can be framed as a large scale combinatorial optimisation problem. Recent advances in quantum computing have introduced new…
Ana Lúcia Leitão, Francisco J Enguita
The evolution of molecular visualization software represents a pivotal yet often underappreciated dimension of computational structural biology and bioinformatics. As the scale and complexity of structural datasets increase, spanning from cryo-electron microscopy reconstructions to proteome-wide AI-predicted models…