15 papers · ranked by Valyu relevance
Jacqueline Michelle Metsch, Anne-Christin Hauschild
The increasing digitalisation of multi-modal data in medicine and novel artificial intelligence (AI) algorithms opens up a large number of opportunities for predictive models. In particular, deep learning models show great performance in the medical field. A major limitation of such powerful but complex models…
Jacqueline Beinecke, Anna Saranti, Alessa Angerschmid, Bastian Pfeifer + 3 more
Lack of trust in artificial intelligence (AI) models in medicine is still the key blockage for the use of AI in clinical decision support systems (CDSS). Although AI models are already performing excellently in systems medicine, their black-box nature entails that patient-specific decisions are incomprehensible for the…
Manu Aggarwal, NG Cogan, Vipul Periwal
Deep neural networks (DNNs) are powerful tools for data-driven predictive machine learning, but their complex architecture obscures mechanistic relations that they have learned from data. This information is critical to the scientific method of hypotheses development, experiment design, and model validation, especially…
Anna Paola Carrieri, Niina Haiminen, Sean Maudsley-Barton, Laura-Jayne Gardiner + 14 more
Alterations in the human microbiome have been observed in a variety of conditions such has asthma, gingivitis, dermatitis and cancer, and much remains to be learned about the links between the microbiome and human health. The fusion of artificial intelligence with rich microbiome datasets can offer an improved…
Haomiao Wang, Julien Aligon, Julien May, Emmanuel Doumard + 6 more
Although the benefits of machine learning (ML) are undeniable in health-care, explainability plays a vital role in improving transparency and understanding the most decisive and persuasive variables for prediction. The challenge is to identify explanations that make sense to the biomedical expert. This work proposes…
Jacqueline Michelle Metsch, Philip Hempel, Miriam Cindy Maurer, Nicolai Spicher + 1 more
Despite the growing success of deep learning (DL) in multivariate time-series classification, such as 12-lead electrocardiography (ECG), widespread integration into clinical practice has yet to be achieved. The limited transparency of DL hinders clinical adoption, where understanding model decisions is crucial for…
D. Petkovic, A. Alavi, D. Cai, J. Yang + 1 more
Machine Learning (ML) is becoming an increasingly critical technology in many areas. However, its complexity and its frequent non-transparency create significant challenges, especially in the biomedical and health areas. One of the critical components in addressing the above challenges is the explainability or…
Etienne Thoret, Thomas Andrillon, Damien Léger, Daniel Pressnitzer
Many scientific fields now use machine-learning tools to assist with complex classification tasks. In neuroscience, automatic classifiers may be useful to diagnose medical images, monitor electrophysiological signals, or decode perceptual and cognitive states from neural signals. However, such tools often remain…
Félix Furger, Julien Aligon, Miguel Thomas, Emmanuel Doumard + 3 more
In the last decades, the utility of Machine Learning (ML) in the biomedical domain has been demonstrated repeatedly. Their inherent opacity need augmenting ML with explainability techniques. A common practice in model explainability however, is to focus solely on the explanatory values themselves without accounting for…
Zohreh Shams, Botty Dimanov, Sumaiyah Kola, Nikola Simidjievski + 6 more
Deep learning models are receiving increasing attention in clinical decision-making, however the lack of interpretability and explainability impedes their deployment in day-to-day clinical practice. We propose REM, an interpretable and explainable methodology for extracting rules from deep neural networks and combining…
Bryant Han, Qingling Duan, Ting Hu
Machine learning models in biomedicine have become increasingly complex, often functioning as black boxes. However, understanding contributors to disease and making actionable health interventions requires interpretable models. Common explainable AI methods like SHAP focus on feature importance but fall short in…
Olatomiwa O. Bifarin, Facundo M. Fernández
Metabolomics generates complex data necessitating advanced computational methods for generating biological insight. While machine learning (ML) is promising, the challenges of selecting the best algorithms and tuning hyperparameters, particularly for nonexperts, remain. Automated machine learning (AutoML) can…
Matan Fintz, Margarita Osadchy, Uri Hertz
Deep neural networks (DNN) models have the potential to provide new insights in the study of human decision making, due to their high capacity and data-driven design. While these models may be able to go beyond theory-driven models in predicting human behaviour, their opaque nature limits their ability to explain how…
Kenrick Schulze, Felix Peppert, Christof Schütte, Vikram Sunkara
Healthcare guided by semantic segmentation has the potential to improve our quality of life through early and accurate disease detection. Convolutional Neural Networks, especially the U-Net-based architectures, are currently the state-of-the-art learningbased segmentation methods and have given unprecedented…
Charles A. Ellis, Robyn L. Miller, Vince D. Calhoun
The frequency domain of electroencephalography (EEG) data has developed as a particularly important area of EEG analysis. EEG spectra have been analyzed with explainable machine learning and deep learning methods. However, as deep learning has developed, most studies use raw EEG data, which is not well-suited for…