8 papers · ranked by Valyu relevance
Li Peng, Weisi Lai, Jian Huang, Yan Zhong
Early detection of preeclampsia with noninvasive and reliable biomarkers is the foremost step for minimizing adverse effects during pregnancy. However, none maternal serum analyte evaluated so far is sufficiently accurate to allow recommending their routine use. Microarray was used to first identify differentially…
Wenbin Li, Rui Fan, Kun Xie, Jiehua Zhong + 12 more
EV-miRNAs are promising gastric cancer (GC) biomarkers for early diagnosis, yet their clinical application is limited by major detection challenges arising from the low abundance and high sequence homology of EV-miRNAs. Herein, we developed a dual-mode platform for sensitive EV-miRNA in situ profiling based on…
Maria B. Walter Costa, Rose Brouns, Maria Schreiber, Aristeidis Litos + 5 more
Understanding the adaptations of microorganisms to their environment is key to predicting the stability and dynamics of microbial communities. To uncover molecular mechanisms of environmental response, we extracted genomic features from 13,554 prokaryotic isolates, and trained machine learning models to identify which…
Shangru Jia, Artem Lysenko, Keith A Boroevich, Alok Sharma + 1 more
Prognostic stratification in multiple myeloma (MM) relies on staging systems fixed at diagnosis, discarding temporal information accumulated during treatment. We developed a dynamic multimodal framework that predicts residual overall survival from observation windows of 1-18 months post-diagnosis. The model integrates…
Yuqiao Liu, Siyu Yi, Hengchuang Yin, Wei Ju
Single-cell RNA sequencing profiles cellular heterogeneity at atlas scale, making automated annotation essential. However, target datasets often contain novel cell types missing from incomplete references. We present scOLAR, an ontology-guided open-set framework that learns prototypes over the Cell Ontology and uses…
Md Shafayet Hossain, Yi-Ping Phoebe Chen
Non-coding RNAs (ncRNAs), once considered genomic dark matter, are now established as key regulators of gene expression with widespread roles in cellular homeostasis and disease. In cancer, ncRNA expression is frequently and systematically dysregulated, and many of these molecules circulate in stable, protected form…
Samuel Cutfield, Katherine Ember, Clinton Turner, Jason Correia + 5 more
Significance Maximizing brain tumor resection while preserving neurological function remains a neurosurgical challenge. Current intraoperative tools, including MRI, ultrasound, and frozen section, disrupt workflow and provide limited real-time molecular information. Aim This review synthesizes evidence for Raman…
Hayden Johnson, Boris A. Vinatzer, Reza Mazloom, Kassaye Belay + 2 more
Rapid and accurate microbial identification is critical for interpreting biological data in basic research and when making applied decisions on how to effectively treat patients and control human, animal, and plant diseases. Advancements in high-throughput sequencing have the potential to expedite fungal species…