11 papers · ranked by Valyu relevance
Quazi Ishtiaque Mahmud, Ali TehraniJamsaz, Hung Phan, Nesreen K. Ahmed + 1 more
'Nesreen K. Ahmed' 'Ali Jannesari'] Parallelizing sequentially written programs is a challenging task. Even experienced developers need to spend considerable time finding parallelism opportunities and then actually writing parallel versions of sequentially written programs. To address this issue, we present AUTOPARLLM…
Authors not listed
Protein conformational landscapes contain the functionally relevant information useful for understanding biological processes. Mapping out conformational landscapes provides valuable insights into protein behaviors and biological phenomena, and has relevance to therapeutic design. While experimental structural biology…
Martijn Naaijer, Dirk Roorda
In this article we develop an algorithm to detect parallel texts in the Masoretic Text of the Hebrew Bible. The results are presented online and chapters in the Hebrew Bible containing parallel passages can be inspected synoptically. Differences between parallel passages are highlighted. In a similar way the MT of…
Ido Ben-Shalom, Charles Lin, Brian Radak, Woody Sherman + 1 more
Molecular dynamics (MD) simulations of proteins are commonly used to sample from the Boltzmann distribution of conformational states, with wide-ranging applications spanning chemistry, biophysics, and drug discovery. However, MD can be inefficient at equilibrating water occupancy for buried cavities in proteins that…
Authors not listed
Computing electrostatic interactions remains the bottleneck of molecular dynamics (MD) simulations despite more than a century of effort in developing methods to accelerate the calculation. Previously we have developed the Spherical Grid and Treecode (SGT) and Gauss-Legendre-Spherical-t (GLST) algorithms for…
Jordan Bell
We work through Book I of Euclid's Elements with our focus on application of areas (I.42, I.44, I.45). We summarize alternate constructions from medieval editions of Euclid's elements and ancient and medieval commentaries. We remark that Euclid's proof of I.44 involves a seldom commented on use of superposition, but…
Authors not listed
> Yet there have been and still are geometers and philosophers, and even some of the most distinguished, who doubt whether the whole universe, or to speak more widely, the whole of being, was only created in Euclid's geometry; they even dare to dream that two parallel lines, which according to Euclid can never meet on…
Piotr Błaszczyk, Anna Petiurenko
In this paper, we reconstruct Euclid's theory of similar triangles, as developed in Book VI of the Elements, along with its 20th-century counterparts, formulated within the systems of Hilbert, Birkhoff, Borsuk and Szmielew, Millman and Parker, as well as Hartshorne. In the final sections, we present recent developments…
Caroline Arnoux, Luis-Adrian Perez-Covarrubias, Alexandre Khaldi, Quentin Carlier + 4 more
Although additive manufacturing using multi-photon direct laser writing is nowadays considered as a major tool in the fabrication of future nano/micro-objects and optical components, it is currently limited by the low throughput of the writing process. To circumvent this issue, massive parallelization of the write…
Yuriy Zakharyan
In this paper the concept of homothetic parallelogram is introduced. This concept is a generalization of Varignon's and Wittenbauer's parallelograms of an arbitrary quadrangle, whose diagonals are not parallel. A formula for the area and perimeter of a homothetic parallelogram for the case when quadrangles are not…
Hongyang Dong, Simon D.M. Jacques, Keith T. Butler, Olof Gutowski + 4 more
In this study, we introduce a method designed to eliminate parallax artefacts present in Xray powder diffraction computed tomography data acquired from large samples. These parallax artefacts manifest as artificial peak shifting, broadening and splitting, leading to inaccurate physicochemical information, such as…