17 papers · ranked by Valyu relevance
Krai Cheamsawat, Thiparat Chotibut, Xiao Yuan, Xiaoming Zhang + 1 more
'Bálint Koczor'] Quantum reservoir computing (QRC) has emerged as a promising paradigm for harnessing near-term quantum devices to tackle temporal machine learning tasks. Yet, identifying the mechanisms that underlie enhanced performance remains challenging, particularly in many-body open systems where nonlinear…
Yiming Dong, Fajia Sun, Zhi Ping, Qi Ouyang + 1 more
The global demand for data storage is currently outpacing the world's storage capabilities. DNA, the carrier of natural genetic information, offers a stable, resource- and energy-efficient and sustainable data storage solution. In this review, we summarize the fundamental theory, research history, and technical…
Yixin Wang, Md Noor-A-Rahim, Jingyun Zhang, Erry Gunawan + 2 more
'Yong Liang Guan' 'Chueh Loo Poh'] Background With the inherent high density and durable preservation, DNA has been recently recognized as a distinguished medium to store enormous data over millennia. To overcome the limitations existing in a recently reported high-capacity DNA data storage while achieving a…
Paige S. Spencer, José M. Barral
The genetic code is said to be redundant in that the same amino acid residue can be encoded by multiple, so-called synonymous, codons. If all properties of synonymous codons were entirely equivalent, one would expect that they would be equally distributed along protein coding sequences. However, many studies over the…
Frank Gelens, Juho Äijälä, Louis Roberts, Misako Komatsu + 7 more
A relevant question concerning inter-areal communication in the cortex is whether these interactions are synergistic. Synergy refers to the complementary effect of multiple brain signals conveying more information than the sum of each isolated signal. Redundancy, on the other hand, refers to the common information…
David J. D'Onofrio, David L. Abel
The codon redundancy (“degeneracy”) found in protein-coding regions of mRNA also prescribes Translational Pausing (TP). When coupled with the appropriate interpreters, multiple meanings and functions are programmed into the same sequence of configurable switch-settings. This additional layer of Ontological Prescriptive…
Tomasz Krokosz, Jarogniew Rykowski, Małgorzata Zajęcka, Robert Brzoza-Woch + 2 more
'Robert Brzoza-Woch' 'Leszek Rutkowski' 'Amitabh Mishra'] Modern, commonly used cryptosystems based on encryption keys require that the length of the stream of encrypted data is approximately the length of the key or longer. In practice, this approach unnecessarily complicates strong encryption of very short messages…
Marius Welzel, Peter Michael Schwarz, Hannah F. Löchel, Tolganay Kabdullayeva + 4 more
'Tolganay Kabdullayeva' 'Sandra Clemens' 'Anke Becker' 'Bernd Freisleben' 'Dominik Heider'] The extensive information capacity of DNA, coupled with decreasing costs for DNA synthesis and sequencing, makes DNA an attractive alternative to traditional data storage. The processes of writing, storing, and reading DNA…
Louis Roberts, Juho Äijälä, Florian Burger, Cem Uran + 6 more
The cortex generates diverse neural dynamics, ranging from broadband fluctuations to narrowband oscillations at specific frequencies. Here, we investigated whether broadband and oscillatory dynamics play different roles in the encoding and transmission of visual information. We used information-theoretical measures to…
Leonid V. Bystrykh, Jo-Ann L. Stanton
The diversity and scope of multiplex parallel sequencing applications is steadily increasing. Critically, multiplex parallel sequencing applications methods rely on the use of barcoded primers for sample identification, and the quality of the barcodes directly impacts the quality of the resulting sequence data.…
David M. Benton, You Yang
Concurrent coding is an encoding scheme with ‘holographic’ type properties that are shown here to be robust against a significant amount of noise and signal loss. This single encoding scheme is able to correct for random errors and burst errors simultaneously, but does not rely on cyclic codes. A simple and practical…
Taufiq Hidayat, Asmala Ahmad, Hea Choon Ngo, Gui-Bin Bian
An implicational base is knowledge extracted from a formal context. The implicational base of a formal context consists of attribute implications which are sound, complete, and non-redundant regarding to the formal context. Non-redundant means that each attribute implication in the implication base cannot be inferred…
M Baritha Begum, N. Deepa, Mueen Uddin, Rajesh Kaluri + 2 more
'Maha Abdelhaq' 'Raed Alsaqour'] Data stored on physical storage devices and transmitted over communication channels often have a lot of redundant information, which can be reduced through compression techniques to conserve space and reduce the time it takes to transmit the data. The need for adequate security…
Carl Kingsford, Rob Patro
Motivation: Storing, transmitting and archiving data produced by next-generation sequencing is a significant computational burden. New compression techniques tailored to short-read sequence data are needed. Results: We present here an approach to compression that reduces the difficulty of managing large-scale…
Dan Tulpan, Chaouki Regoui, Guillaume Durand, Luc Belliveau + 1 more
'Serge Léger'] This paper presents a novel hybrid DNA encryption (HyDEn) approach that uses randomized assignments of unique error-correcting DNA Hamming code words for single characters in the extended ASCII set. HyDEn relies on custom-built quaternary codes and a private key used in the randomized assignment of code…
Xu Yang, Langwen Lai, Xiaoli Qiang, Ming Deng + 3 more
DNA, as the storage medium in organisms, can address the shortcomings of existing electromagnetic storage media, such as low information density, high maintenance power consumption, and short storage time. Current research on DNA storage mainly focuses on designing corresponding encoders to convert binary data into DNA…
Raphael Cohen, Michael Elhadad, Noémie Elhadad
Background The increasing availability of Electronic Health Record (EHR) data and specifically free-text patient notes presents opportunities for phenotype extraction. Text-mining methods in particular can help disease modeling by mapping named-entities mentions to terminologies and clustering semantically related…