26 papers · ranked by Valyu relevance
Zheng Zhang, Yong Xu, Jian Yang, Xuelong Li + 1 more
—Sparse representation has attracted much attention from researchers in fields of signal processing, image processing, computer vision and pattern recognition. Sparse representation also has a good reputation in both theoretical research and practical applications. Many different algorithms have been proposed for…
Yifeng Li, Alioune Ngom
Background High-throughput genomic and proteomic data have important applications in medicine including prevention, diagnosis, treatment, and prognosis of diseases, and molecular biology, for example pathway identification. Many of such applications can be formulated to classification and dimension reduction problems…
Maliheh Miri, Mohammad Taghi Sadeghi, Vahid Abootalebi
Sparse representation of signals has achieved satisfactory results in classification applications compared to the conventional methods. Microarray data, which are obtained from monitoring the expression levels of thousands of genes simultaneously, have very high dimensions in relation to the small number of samples.…
Sunil Kumar Prabhakar, Young-Gi Ju, Harikumar Rajaguru, Dong-Ok Won
In comparison to other biomedical signals, electroencephalography (EEG) signals are quite complex in nature, so it requires a versatile model for feature extraction and classification. The structural information that prevails in the originally featured matrix is usually lost when dealing with standard feature…
Shuguang Han, Ning Wang, Yuxin Guo, Furong Tang + 3 more
Inspired by L1-norm minimization methods, such as basis pursuit, compressed sensing, and Lasso feature selection, in recent years, sparse representation shows up as a novel and potent data processing method and displays powerful superiority. Researchers have not only extended the sparse representation of a signal to…
Laura Rebollo-Neira, Viktor Vegh
A competitive scheme for economic storage of the informational content of an X-Ray image, as it can be used for further processing, is presented. It is demonstrated that sparse representation of that type of data can be encapsulated in a small file without affecting the quality of the recovered image. The proposed…
Mohammad Abbasi, Connor Sanderford, Narendian Raghu, Benjamin B Bartelle
We have developed representation learning methods, specifically to address the constraints and advantages of complex spatial data. Sparse filtering (SFt), uses principles of sparsity and mutual information to build representations from both global and local features from a minimal list of samples. Critically, the…
Ao Li, Deyun Chen, Zhiqiang Wu, Guanglu Sun + 2 more
'Quanquan Gu'] Recently, sparse representation, which relies on the underlying assumption that samples can be sparsely represented by their labeled neighbors, has been applied with great success to image classification problems. Through sparse representation-based classification (SRC), the label can be assigned with…
Reza Farrahi Moghaddam, Mohamed Cheriet
This is the first report on Working Paper WP-RFM-14-01. The potential and capability of sparse representations is well-known. However, their (multivariate variable) vectorial form, which is completely fine in many fields and disciplines, results in removal and filtering of important "spatial" relations that are…
Fanhua Shang, Bingkun Wei, Yuanyuan Liu, Hongying Liu + 2 more
'Licheng Jiao'] In recent years, a series of matching pursuit and hard thresholding algorithms have been proposed to solve the sparse representation problem with $ℓ_{0}$-norm constraint. In addition, some stochastic hard thresholding methods were also proposed, such as stochastic gradient hard thresholding (SG-HT) and…
Wang Wei, Tang Can, Wang Xin, Luo Yanhong + 2 more
An image object recognition approach based on deep features and adaptive weighted joint sparse representation (D-AJSR) is proposed in this paper. D-AJSR is a data-lightweight classification framework, which can classify and recognize objects well with few training samples. In D-AJSR, the convolutional neural network…
Zhenlan Liang, Min Li, Ruiqing Zheng, Yu Tian + 4 more
Accurate identification of cell types from single-cell RNA sequencing (scRNA-seq) data plays a critical role in a variety of scRNA-seq analysis studies. It corresponds to solving an unsupervised clustering problem, in which the similarity measurement between cells in a high dimensional space affects the result…
Fabio Massimo Zennaro, Ke Chen
In this paper we present a theoretical analysis to understand sparse filtering, a recent and effective algorithm for unsupervised learning. The aim of this research is not to show whether or how well sparse filtering works, but to understand why and when sparse filtering does work. We provide a thorough theoretical…
Jianjun Qian, Jian Yang, Yong Xu, Hong-Bin Shen
Recently, the regularized coding-based classification methods (e.g. SRC and CRC) show a great potential for pattern classification. However, most existing coding methods assume that the representation residuals are uncorrelated. In real-world applications, this assumption does not hold. In this paper, we take account…
Costa, Valérie, Fel, Thomas + 6 more
Sparse autoencoders (SAEs) have recently become central tools for interpretability, leveraging dictionary learning principles to extract sparse, interpretable features from neural representations whose underlying structure is typically unknown. This paper evaluates SAEs in a controlled setting using MNIST, which…
Rishabh Raj, Dar Dahlen, Kyle Duyck, C. Ron Yu
The brain has a remarkable ability to recognize objects from noisy or corrupted sensory inputs. How this cognitive robustness is achieved computationally remains unknown. We present a coding paradigm, which encodes structural dependence among features of the input and transforms various forms of the same input into the…
Yanbo Lian, Anthony N. Burkitt
Sparse coding, predictive coding and divisive normalization have each been found to be principles that underlie the function of neural circuits in many parts of the brain, supported by substantial experimental evidence. However, the connections between these related principles are still poorly understood. In this…
Krishnakumar Balasubramanian, Kai Yu, Guy Lebanon
We propose and analyze a novel framework for learning sparse representations, based on two statistical techniques: kernel smoothing and marginal regression. The proposed approach provides a flexible framework for incorporating feature similarity or temporal information present in data sets, via non-parametric kernel…
Xian Wei, Hao Shen, Martin Kleinsteuber
—This work studies the problem of learning appropriate low dimensional image representations. We propose a generic algorithmic framework, which leverages two classic representation learning paradigms, i.e., sparse representation and the trace quotient criterion, to disentangle underlying factors of variation in high…
Ming Yin, Shengli Xie, Yi Guo, Junbin Gao + 1 more
—Due to its promising classification performance, sparse representation based classification(SRC) algorithm has attracted great attention in the past few years. However, the existing SRC type methods apply only to vector data in Euclidean space. As such, there is still no satisfactory approach to conduct classification…
Sanjar Adilov
Machine learning models for molecular-property prediction typically work with molecular representations in the form of fingerprints, descriptors, or graphs. In case of fingerprints and descriptors, molecular representations usually comprise thousands of features, which causes the curse of dimensionality for many…
Kelsey Hatzell, Yanjie Zheng
X-ray Computed Tomography (CT) is a non-invasive, non-destructive approach to imaging materials, material systems and engineered components in two- and three- dimensions. Acquisition of 3D images requires the collection of hundreds or thousands of through-thickness X-ray radiographic images from different angles. Such…
David Buterez, Jon Paul Janet, Steven Kiddle, Pietro Liò
We investigate the potential of graph neural networks for transfer learning and improving molecular property prediction on sparse and expensive to acquire high-fidelity data by leveraging low-fidelity measurements as an inexpensive proxy for a targeted property ofinterest. This problem arises in discovery processes…
Anthony Onwuli, Keith T. Butler, Aron Walsh
High-dimensional representations of the elements have become common within the field of materials informatics to build useful, structure-agnostic models for the chemistry of materials. However, the characteristics of elements change when they adopt a given oxidation state, with distinct structural preferences and…
Ping Yang, E. Adrian Henle, Cory M. Simon, Xiaoli Fern
Pesticides benefit agriculture by increasing crop yield, quality, and security. However, pesticides may inadvertently harm bees, which are valuable as pollinators. Thus, candidate pesticides in development pipelines must be assessed for toxicity to bees. Leveraging a data set of 382 molecules with toxicity labels from…
Authors not listed
Quantitative Structure-Activity Relationship (QSAR) modeling is a pillar of computational drug discovery. However, standard machine learning (ML) models are often confounded by the high-dimensional and intensely correlated nature of molecular descriptors. A model may identify a "bulk" property (e.g., molecular weight)…