22 papers · ranked by Valyu relevance
René A Zelaya, Aaron K. Wong, Alex T. Frase, Marylyn D. Ritchie + 1 more
The adoption of new bioinformatics webservers provides biological researchers with new analytical opportunities but also raise workflow challenges. These challenges include sharing collections of genes with collaborators, translating gene identifiers to the most appropriate nomenclature for each server, tracking these…
Huawei Wang, Dianli Guo, Hua Zhang, Qiaoyan Wen
Recently, many dynamic ID based remote user authentication schemes using smart card have been proposed to improve the security in multiple servers architecture authentication systems. In 2017, Kumari and Om proposed an anonymous multi-server authenticated key agreement scheme, which is believed to be secure against a…
Peng Jiang, Qiaoyan Wen, Wenmin Li, Zhengping Jin + 1 more
With advancement of computer community and widespread dissemination of network applications, users generally need multiple servers to provide different services. Accordingly, the multiserver architecture has been prevalent, and designing a secure and efficient remote user authentication under multiserver architecture…
Sergey Lyskov, Fang-Chieh Chou, Shane Ó. Conchúir, Bryan S. Der + 14 more
'Kevin Drew' 'Daisuke Kuroda' 'Jianqing Xu' 'Brian D. Weitzner' 'P. Douglas Renfrew' 'Parin Sripakdeevong' 'Benjamin Borgo' 'James J. Havranek' 'Brian Kuhlman' 'Tanja Kortemme' 'Richard Bonneau' 'Jeffrey J. Gray' 'Rhiju Das' 'Vladimir N. Uversky'] The Rosetta molecular modeling software package provides experimentally…
Daniel Jaschob, Michael Riffle
Background Laboratories engaged in computational biology or bioinformatics frequently need to run lengthy, multistep, and user-driven computational jobs. Each job can tie up a computer for a few minutes to several days, and many laboratories lack the expertise or resources to build and maintain a dedicated computer…
A B M Moniruzzaman, Md Waliullah, Md. Sadekur Rahman
— This paper designs and implements a high availability clusters and incorporated with load balance infrastructure of web servers. The paper described system can provide full facilities to the website hosting provider and large business organizations. This system can provide continuous service though any system…
David Ferere, Irvin Dongo, Yudith Cardinale, Claudia Campolo
The increasing evolution of computing technologies has fostered the new intelligent concept of Ubiquitous computing (Ubicomp). Ubicomp environments encompass the introduction of new paradigms, such as Internet of Things (IoT), Mobile computing, and Wearable computing, into communication networks, which demands more…
Gary A. McGilvary, Josep Rius, Íñigo Goiri, Francesc Solsona + 2 more
'Adam Barker' 'Malcolm Atkinson'] Abstract—Server clustering is a common design principle employed by many organisations who require high availability, scalability and easier management of their infrastructure. Servers are typically clustered according to the service they provide whether it be the application(s)…
Anna Berenberg, Brad Calder
This is a survey paper that explores six Cloud-based deployment archetypes for Cloud applications and the tradeoffs between them to achieve high availability, low end-user latency, and acceptable costs. These are (1) Zonal, (2) Regional, (3) Multi-Regional, (4) Global, (5) Hybrid, and (6) Multi-Cloud deployment…
Monika Vogler, Jonas Busk, Hamidreza Hajiyani, Peter Bjørn Jørgensen + 9 more
The future of materials science is borderless, cooperative, and distributed across the globe. This necessitates flexible, reconfigurable software defined research workflows, which we herein demonstrate by integrating multiple disciplines and modalities. Our brokering approach to research orchestration exposes entire…
Deepika Saxena, Rishabh Gupta, Ashutosh Kumar Singh
Multi-cloud concept has broaden the world of cloud computing and has become a buzzword today. The word "Multi-cloud" envisions utilization of services from multiple heterogeneous cloud providers via a single architecture at customer (e.g. organization) premises. Though cloud computing has many issues and offers open…
Authors not listed
Machine learning models are transforming data-driven research across scientific disciplines, yet their deployment as accessible and reliable web services remains a significant challenge. We introduce the NERDD framework, a scalable, maintainable, and secure microservices platform designed to support the sustainable…
Ram Swaminathan, K. Karnavel
Software-as-a-Service (SaaS) is a form of cloud computi ng that relieves the user from the concern of hardware, software installation and management. It is an emerging business model that delivers software applications to the users through Web -based technology. Software vendors have varying requirements and SaaS…
Zhiyong Shan, Tzi‐cker Chiueh, Xin Wang
—OS-level virtualization techniques virtualize system resources at the system call interface, has the distinct advantage of smaller run-time resource requirements as compared to HAL-level virtualization techniques, and thus forms an important building block for virtualizing parallel and distributed applications such as…
Anupam Gautam, Wenhuan Zeng, Daniel H. Huson
Metagenomic projects of large sequencing datasets (totaling hundreds of gigabytes of data). Thus, computational preprocessing and analysis are usually performed on a server rather than on a personal computer. The results of such analyses are then usually explored interactively. One approach is to use MEGAN, an…
Paulo S. L. Souza, Regina H. C. Santana, Marcos J. Santana, Ed Zaluska + 3 more
'Ed Zaluska' 'Bruno S. Faical' 'Julio C. Estrella' 'Hussein Suleman'] The lack of precision to predict service performance through load indices may lead to wrong decisions regarding the use of web services, compromising service performance and raising platform cost unnecessarily. This paper presents experimental…
Andreas Prlić, Thomas A Down, Eugene Kulesha, Robert D Finn + 2 more
'Andreas Kähäri' 'Tim JP Hubbard'] Background The Distributed Annotation System (DAS) is a network protocol for exchanging biological data. It is frequently used to share annotations of genomes and protein sequence. Results Here we present several extensions to the current DAS 1.5 protocol. These provide new commands…
Ling-Hong Hung, Niharika Nasam, Chris Biju, Wes Lloyd + 1 more
Singe cell RNA sequencing (scRNA-seq) has become a routine method for measuring cell activities. Processing large scRNA-seq datasets requires high-performance computing resources. The emergence of cloud computing allows us to leverage its on-demand capabilities without major investment in infrastructure. Serverless…
Ling-Hong Hung, Niharika Nasam, Wes Lloyd, Ka Yee Yeung
Singe cell RNA sequencing (scRNA-seq) has become a routine method for measuring cell activities. Processing large scRNA-seq datasets requires high-performance computing resources. The emergence of cloud computing allows us to leverage its on-demand capabilities without major investment in infrastructure. Serverless…
Lei Gao, Hua Dai, Tong-Liang Zhang, Kuo-Chen Chou + 1 more
'Indra Neil Sarkar'] Some of the approaches have been developed to retrieve data automatically from one or multiple remote biological data sources. However, most of them require researchers to remain online and wait for returned results. The latter not only requires highly available network connection, but also may…
Kamal Choudhary
SLMat is a serverless, browser-based toolkit that revolutionizes computational materials science by offering a scalable and efficient alternative to traditional server-based platforms like Google Colab. By eliminating the need for server management and providing persistent setups, SLMat enhances productivity and…
Jean Fan, David Fan, Kamil Slowikowski, Nils Gehlenborg + 1 more
We present a purely client-side web-application, UBiT2 (User-friendly BioInformatics Tools), that provides installation-free, offline alignment, analysis, and visualization of RNA-sequencing as well as qPCR data. Analysis modules were designed with single cell transcriptomic analysis in mind. Using just a browser…