22 papers · ranked by Valyu relevance
Jun-Ha Lee, Hyuk-Yoon Kwon, Qingzhong Liu
In this study, we investigate large-scale digital forensic investigation on Apache Spark using a Windows registry. Because the Windows registry depends on the system on which it operates, the existing forensic methods on the Windows registry have been targeted on the Windows registry in a single system. However, it is…
David Taylor-Robinson, Olia Archangelidi, Siobhán B Carr, Rebecca Cosgriff + 7 more
Data resource basics The UK Cystic Fibrosis Registry is a national, secure, centralized database sponsored and managed by the Cystic Fibrosis Trust, with UK National Health Service (NHS) research ethics approval and consent from each person for whom data are collected. First established in 1995, it records longitudinal…
Pompeu Casanovas, Carmen Pastor Sempere, Marina Echebarria Saenz
Artificial intelligence reaches the land registry not as another tool but as a value chain that turns data into intelligence and intelligence into economic value. This paper argues that the decisive legal move is to place validity, a functional, second-order concept, at the centre of that chain. Rights, liability and…
RAYMOND L. PLANTE, CHANDLER A. BECKER, ANDREA MEDINA-SMITH, KEVIN BRADY + 5 more
'KEVIN BRADY' 'ALDEN DIMA' 'BENJAMIN LONG' 'LAURA M. BARTOLO' 'JAMES A. WARREN' 'ROBERT J. HANISCH'] As a result of a number of national initiatives, we are seeing rapid growth in the data important to materials science that are available over the web. Consequently, it is becoming increasingly difficult for researchers…
Yllka Kodra, Jérôme Weinbach, Manuel Posada-de-la-Paz, Alessio Coi + 25 more
'S. Lydie Lemonnier' 'David van Enckevort' 'Marco Roos' 'Annika Jacobsen' 'Ronald Cornet' 'S. Faisal Ahmed' 'Virginie Bros-Facer' 'Veronica Popa' 'Marieke Van Meel' 'Daniel Renault' 'Rainald von Gizycki' 'Michele Santoro' 'Paul Landais' 'Paola Torreri' 'Claudio Carta' 'Deborah Mascalzoni' 'Sabina Gainotti' 'Estrella…
Charles Tapley Hoyt, Meghan Balk, Tiffany J. Callahan, Daniel Domingo-Fernández + 15 more
The standardized identification of biomedical entities is a cornerstone of interoperability, reuse, and data integration in the life sciences. Several registries have been developed to catalog resources maintaining identifiers for biomedical entities such as small molecules, proteins, cell lines, and clinical trials.…
Pramila Kalra, Gurinder Mohan, Prasanta Kumar Bhattacharya, Iada Tiewsoh + 18 more
Non-communicable chronic diseases, particularly Diabetes mellitus, a silent epidemic of this era, are rapidly on the rise in India. It is critical to devise strategies to ensure effective diagnosis, prevention, and treatment of the increasing disease burden. Given the lack of large scale information on Type 1 and Type…
Jeaphianne van Rijn, Antreas Afantitis, Mustafa Culha, Maria Dusinska + 10 more
Data management of nanomaterials and nanosafety data needs to operate under the FAIR (findability, accessibility, interoperability, and reusability) principles and this requires a unique, global identifier per nanomaterial. Existing identifiers may not always be applicable, or sufficient to definitively identify the…
Anna-Lisa Oechsle, Cornelia Wiechers, Veronique Abadie, Francois Abel + 2 more
'Francois Abel' 'Corstiaan Breugem' 'Christian F. Poets'] Background Robin sequence (RS) is a congenital condition characterized by micrognathia, glossoptosis and upper airway obstruction. Diagnosis and treatment are characterized by heterogeneity, resulting in a lack of uniformly collected data. Methods We have set up…
Markus Demleitner, Paul Harrison, Mark Taylor, Jonathan Normand
The Virtual Observatory Registry is a distributed directory of information systems and other resources relevant to astronomy. To make it useful, facilities to query that directory must be provided to humans and machines alike. This article reviews the development and status of such facilities, also considering the…
Markus Demleitner, Paul Harrison, M. Molinaro, Gretchen Greene + 2 more
Registries provide a mechanism with which VO applications can discover and select resources – first and foremost data and services – that are relevant for a particular scientific problem. This specification defines an interface for searching this resource metadata based on the IVOA's TAP protocol. It specifies a set of…
Vanja Paunić, Loren Gragert, Joel Schneider, Carlheinz Müller + 1 more
Unrelated stem cell registries have been collecting HLA typing of volunteer bone marrow donors for over 25 years. Donor selection for hematopoietic stem cell transplantation is based primarily on matching the alleles of donors and patients at five polymorphic HLA loci. As HLA typing technologies have continually…
J. R. Lothian, Anders Holmberg, Allyson Seyb
The cross linking of disparate data sets across time, space and sources (administrative, surveys, censuses and registers) is probably the foremost current issue facing Central Statistical Agencies (CSA). If one reviews the current literature looking for the prevalent challenges facing CSAs, three issues stand out: 1)…
Laura Miron, Rafael S. Gonçalves, Mark A. Musen
Metadata that are structured using principled schemas and that use terms from ontologies are essential to making biomedical data findable and reusable for downstream analyses. The largest source of metadata that describes the experimental protocol, funding, and scientific leadership of clinical studies is…
Markus Demleitner, Gretchen Greene, Pierre Le Sidaner, Raymond Plante
'Raymond Plante'] In the Virtual Observatory (VO), the Registry provides the mechanism with which users and applications discover and select resources – typically, data and services – that are relevant for a particular scientific problem. Even though the VO adopted technologies in particular from the bibliographic…
Jingwen Bai, Chakradhar Bandla, Jiaxin Guo, Roberto Vera Alvarez + 6 more
BioContainers is an open-source project that aims to create, store, and distribute bioinformatics software containers and packages. The BioContainers community has developed a set of guidelines to standardize the software containers including the metadata, versions, licenses, and/or software dependencies. BioContainers…
Gregory A. Landrum, Jessica Braun, Paul Katzberger, Marc T. Lehner + 1 more
Here, we present lwreg, a lightweight, yet flexible chemical registration system supporting the capture of both two-dimensional molecular structures (topologies) and three-dimensional conformers. lwreg is open source, with a simple Python API and is designed to be easily integrated into computational workflows. In…
Wen Ting Maria Tu, Stephen Makonin
As part of the investigation done by the IEEE Standards Association P2957 Working Group, called Big Data Governance and Metadata Management, the use of persistent identifiers (PIDs) is looked at for tackling the problem of reproducible research and science. This short paper proposes a preliminary method using PIDs to…
Leigh Dodds
The FAIR principles need to be applied in context. To do that, we need to understand both the needs of data users and the characteristics of the data to be shared. This Opinion introduces ten different dataset archetypes that can be used to inform plans for how data are to be accessed, used, and shared.
Authors not listed
The discoverability and reusability of data is critical for machine learning to drive new discovery in the chemical sciences, and the ‘FAIR Guiding Principles for scientific data management and stewardship’ provide a measurable set of guidelines that can be used to ensure the accessibility of reusable data. We…
Henry Rzepa
The history of the development of two tools for managing research resources and the data produced from them is summarised. These tools are a portal or electronic laboratory notebook for computational chemistry interfaced in one direction to a high-performance computing resource and in the other direction to a modern…
Tiqing Liu, Linda Hwang, Stephen K Burley, Carmen I Nitsche + 3 more
BindingDB (bindingdb.org) is a public, web-accessible database of experimentally measured binding affinities between small molecules and proteins, which supports diverse applications including medicinal chemistry, biochemical pathway annotation, training of artificial intelligence models, and computational chemistry…