24 papers · ranked by Valyu relevance
Massimiliano Dal Mas
— In this paper is analyzed the prototyping of the information visualization on a Web Application for community purposes in a collaborative environment representing an evolution of the actual social networks like Facebook, Instagram, Twitter, Linkedin, VirgilioPeople, … The intent of this work is to identify the most…
Li Tao, Rubing Huang, Chenhui Cui, Dave Towey + 3 more
'Wen Xia'] As one of the most popular software applications, a web application is a program, accessible through the web, to dynamically generate content based on user interactions or contextual data, for example, online shopping platforms, social networking sites, and financial services. Web applications operate in…
Richard Newton, Andrew Deonarine, Lorenz Wernisch
Background Creating a user friendly web based application which executes an R script allows physicians, epidemiologists, and others unfamiliar with the statistical language to perform powerful statistical analyses easily. The geographic mapping of data is an important tool in spatial epidemiological analysis, and the R…
Imran Khan, R. Singh
Integration testing is one the important phase in software testing life cycle (STLC). With the fast grow th of internet and web services, web -based applications are also growing rapidly and their importance and complexity is also increasing. Heterogeneous and diverse nature of distributed components, applications…
Marc Chakiachvili, Anne-Muriel Arigon Chifolleau, Vincent Lefort
WAVES is a web application dedicated to bioinformatic tool integration. It provides an efficient way to implement a service for any bioinformatic software. Such services are automatically made available in three ways: web pages, web forms to include in remote websites, and a RESTful web services API to access remotely…
Authors not listed
The exponential growth of chemical literature necessitates the development of automated tools for extracting and curating molecular information from unstructured scientific publications into open-access chemical databases. Current optical chemical structure recognition (OCSR) and named entity recognition solutions…
Tom David Müller, Arslan Siraj, Axel Walter, Jihyung Kim + 9 more
Building User-Friendly Solutions for MS Analysis Authors: ['Tom David Müller' 'Arslan Siraj' 'Axel Walter' 'Jihyung Kim' 'Samuel Wein' 'Johannes von Kleist' 'Ayesha Feroz' 'Matteo Pilz' 'Kyowon Jeong' 'Justin Cyril Sing' 'Joshua Charkow' 'Hannes Luc Röst' 'Timo Sachsenberg'] Liquid chromatography-mass spectrometry…
Milind Agarwal, Kshitiz Ghimire, Joy D. Cogan, Janet Markle
Whole exome sequencing (WES) is commonly used to study monogenic diseases. The application of this sequencing technology has gained in popularity amongst clinicians and researchers as WES pricing has declined. The accumulation of WES data creates a need for a robust, flexible, scalable and easy-to-use analytics…
Hirotaka Okuda, Shinpei Ogata, Saeko Matsuura
Model Driven Development is a promising approach to develop high quality software systems. We have proposed a method of model-driven requirements analysis using Unified Modeling Language (UML). The main feature of our method is to automatically generate a Web user interface prototype from UML requirements analysis…
Federico Marotta, Oliver Stolpe, Benedikt Obermayer, January Weiner + 3 more
In many bioinformatic data analysis projects, it is convenient to visualize plots and results through an interactive web app or dashboard. These interactive reports can then be shared with customers, collaborators, or the general public. Publishing and sharing these apps is not straightforward, becoming especially…
Tran Tri Dang, Tran Khanh Dang
This paper proposes a novel visual model for web applications security monitoring. Although an automated intrusion detection system can shield a web application from common attacks, it usually cannot detect more complicated break-ins. So, a humanassisted monitoring system is an indispensable complement, following the…
Kota Kambara, Sintho Wahyuning Ardie, Daisuke Tsugama
Differential gene expression analysis (DEA) via RNA sequencing (RNA-seq) is essential but remains challenging for wet-lab biologists due to command-line complexities. Centralized web platforms democratize this process but suffer from server congestion, long queuing delays, data privacy risks with proprietary datasets…
Paweł Daniluk, Bartek Wilczyński, Bogdan Lesyng
Background One of the requirements for a successful scientific tool is its availability. Developing a functional web service, however, is usually considered a mundane and ungratifying task, and quite often neglected. When publishing bioinformatic applications, such attitude puts additional burden on the reviewers who…
Authors not listed
Modern drug discovery and chemical biology research relies heavily on analyzing bioassay data. One of the many challenges in bioassay data analysis is identifying false trails, i.e., chemical compounds which initially appear to have desirable activity but are found to be problematic upon further investigation. Badapple…
Authors not listed
For decades, molecular visualization software has been fundamental to education and research in chemistry, structural biology, and materials science. These tools have enabled the inspection of structures, dynamics, and interactions, yet their reliance on two-dimensional (2D) interfaces imposes persistent limitations.…
Nikiforos Karamanis, Denise Carvalho-Silva, Jennifer A. Cham, Luca Fumis + 15 more
Although a scientific web application that is intuitive can help scientists utilize data more easily and advance their research, there is little guidance on how to design such an application in the academic literature. We discuss how we designed an intuitive application for bench scientists working in drug discovery…
Lubos Molcan
Physiological processes oscillate in time. Circadian oscillations, over approximately 24-h, are very important and among the most studied. To evaluate the presence and significance of 24-h oscillations, physiological time distributed data (TDD) are often set to a cosinor model using a wide range of irregularly updated…
Naruki Yoshikawa, Kentaro Rikimaru, Kazuki Yamamoto
Many computer-aided drug design (CADD) methods using deep learning have recently been proposed to explore the chemical space toward novel scaffolds efficiently. However, there is a tradeoff between the ease of generating novel structures and the chemical feasibility of structural formulas. To overcome the limitations…
Seyed M. Mirtaheri, Mustafa Emre Dinçktürk, Salman Hooshmand, Gregor von Bochmann + 2 more
'Gregor von Bochmann' 'Guy-Vincent Jourdan' 'Iosif Viorel Onut'] Quick expansion of the web, and the complexity added to web applications have made the process of crawling a very challenging one. Throughout the history of web crawling many researcher s and industrial groups addressed different issues and challenges…
Samantha Durdy, Cameron J. Hargreaves, Mark Dennison, Benjamin Wagg + 5 more
The discovery of new materials often requires collaboration between experimental and computational chemists. Web based platforms allow more flexibility in this collaboration by giving access to computational tools without the need for access to computational researchers. We present Liverpool Materials Discovery Server…
Guangsheng Yu, Xu Wang, Qin Wang, Tingting Bi + 4 more
'Ren Ping Liu' 'Nektarios Georgalas' 'Andrew Reeves'] GUANGSHENG YU, Data61, CSIRO, Australia XU WANG, GBDTC, University of Technology Sydney, Australia QIN WANG, Data61, CSIRO, Australia TINGTING BI, Data61, CSIRO, Australia YIFEI DONG, GBDTC, University of Technology Sydney, Australia REN PING LIU, GBDTC, University…
Heung Ki Lee, Jaehee Jung, Gangman Yi
Resource management of the main memory and process handler is critical to enhancing the system performance of a web server. Owing to the transaction delay time that affects incoming requests from web clients, web server systems utilize several web processes to anticipate future requests. This procedure is able to…
Authors not listed
Machine learning models are transforming data-driven research across scientific disciplines, yet their deployment as accessible and reliable web services remains a significant challenge. We introduce the NERDD framework, a scalable, maintainable, and secure microservices platform designed to support the sustainable…
Priyanka Rahi
The World Wide Web is a popular and interactive medium to distribute information in this scenario. The web is huge, diverse, ever changing, widely disseminated global information service center. We are familiar with terms like e-commerce, e-governance, e-market, e-finance, e-learning, e-banking etc. for an organization…